Tutorials

Keeper tutorial

This tutorial walks through the Keeper data structure.

To the keeper tutorial

POSE pipeline - multiple myeloma (MM) example

This tutorial walks through the POSE pipeline performed on single-modality RNA data of MM samples from COMPASS as described in the origianl manuscript.

To the MM example

POSE pipeline - extended multiple myeloma (MM) example

This tutorial is an extended version of the MM analysis that walks through the POSE pipeline performed on single-modality RNA data of MM samples from COMPASS as described in the origianl manuscript, with additional descriptions of alternative computational options.

To the extended MM example

POSE pipeline - breast cancer (BC) example

This tutorial walks through the POSE pipeline for a single modality, and touches on the multi-omic fused analysis. The pipeline is demonstrated on BC rna data from TCGA.

To the BC example

POSE pipeline - glioblastoma multiforme (GBM) multi-modal example

This tutorial walks through the POSE pipeline for a multi-omic dataset. The pipeline is demonstrated on GBM data from TCGA.

To the multi-modal GBM example